## ----echo = FALSE, message = FALSE-------------------------------------------- library(DatabaseConnector) ## ----eval=FALSE--------------------------------------------------------------- # connection <- dbConnect( # DatabaseConnectorDriver(), # dbms = "postgresql", # server = "localhost/postgres", # user = "joe", # password = "secret" # ) ## ----echo=FALSE--------------------------------------------------------------- writeLines("Connecting using PostgreSQL driver") ## ----eval=FALSE--------------------------------------------------------------- # dbIsValid(conn) ## ----echo=FALSE--------------------------------------------------------------- TRUE ## ----eval=FALSE--------------------------------------------------------------- # dbGetQuery(connection, "SELECT TOP 3 * FROM cdmv5.person") ## ----echo=FALSE--------------------------------------------------------------- data.frame(person_id = c(1,2,3), gender_concept_id = c(8507, 8507, 8507), year_of_birth = c(1975, 1976, 1977)) ## ----eval=FALSE--------------------------------------------------------------- # res <- dbSendQuery(connection, "SELECT TOP 3 * FROM cdmv5.person") # dbFetch(res) ## ----echo=FALSE--------------------------------------------------------------- data.frame(person_id = c(1,2,3), gender_concept_id = c(8507, 8507, 8507), year_of_birth = c(1975, 1976, 1977)) ## ----eval=FALSE--------------------------------------------------------------- # dbHasCompleted(res) ## ----echo=FALSE--------------------------------------------------------------- TRUE ## ----eval=FALSE--------------------------------------------------------------- # dbClearResult(res) # dbDisconnect(res) ## ----eval=FALSE--------------------------------------------------------------- # library(dpylr) # person <- tbl(connection, inDatabaseSchema("cdmv5", "person")) # person ## ----echo=FALSE--------------------------------------------------------------- data.frame(person_id = c(1,2,3), gender_concept_id = c(8507, 8507, 8507), year_of_birth = c(1975, 1976, 1977)) ## ----eval=FALSE--------------------------------------------------------------- # person %>% # filter(gender_concept_id == 8507) %>% # count() %>% # pull() ## ----echo=FALSE--------------------------------------------------------------- 1234 ## ----eval=FALSE--------------------------------------------------------------- # observationPeriod <- tbl(connection, inDatabaseSchema("cdmv5", "observation_period")) # observationPeriod %>% # filter( # dateDiff("day", observation_period_start_date, observation_period_end_date) > 365 # ) %>% # count() %>% # pull() ## ----echo=FALSE--------------------------------------------------------------- 987 ## ----eval=FALSE--------------------------------------------------------------- # option(sqlRenderTempEmulationSchema = "a_schema") ## ----eval=FALSE--------------------------------------------------------------- # dbWriteTable(connection, "#temp", cars) ## ----echo=FALSE--------------------------------------------------------------- message("Inserting data took 0.053 secs") ## ----eval=FALSE--------------------------------------------------------------- # carsTable <- copy_to(connection, cars) ## ----echo=FALSE--------------------------------------------------------------- writeLines("Created a temporary table named #cars") ## ----eval=FALSE--------------------------------------------------------------- # tempTable <- person %>% # filter(gender_concept_id == 8507) %>% # compute() ## ----echo=FALSE--------------------------------------------------------------- message("Created a temporary table named #dbplyr_001") ## ----eval=FALSE--------------------------------------------------------------- # dropEmulatedTempTables(connection) ## ----eval=FALSE--------------------------------------------------------------- # dbDisconnect(connection)