## ----setup, include=FALSE, eval=TRUE------------------------------------------ knitr::opts_chunk$set(echo = TRUE) library(FossilSim) if(!require(paleotree)) knitr::opts_chunk$set(eval = FALSE) ## ----------------------------------------------------------------------------- record = paleotree::simFossilRecord(p = 0.1, q = 0.1, r = 0.1, nruns = 1, nTotalTaxa = c(30,40), nExtant = 0, nSamp = c(5,25)) converted_record = paleotree.record.to.fossils(record = record) converted_record ## ----------------------------------------------------------------------------- converted_record$tree$origin.time ## ----------------------------------------------------------------------------- t = ape::rtree(6) f = sim.fossils.poisson(rate = 2, tree = t) converted_record = fossils.to.paleotree.record(fossils = f, tree = t) converted_record