## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>", eval = rmarkdown::pandoc_available() ) ## ----out.height=600, out.width="100%"----------------------------------------- library(Racmacs) map_file <- system.file("extdata/h3map2004.ace", package = "Racmacs") map <- read.acmap(map_file) view(map) ## ----out.height=600, out.width="100%"----------------------------------------- pc_run12 <- procrustesMap( map = map, comparison_map = map, optimization_number = 1, comparison_optimization_number = 2 ) view(pc_run12) ## ----------------------------------------------------------------------------- map3d <- optimizeMap( map = map, number_of_dimensions = 3, number_of_optimizations = 10, minimum_column_basis = "none" ) ## ----out.height=600, out.width="100%"----------------------------------------- pc_3d2d <- procrustesMap( map = map3d, comparison_map = map ) view(pc_3d2d)