Implements an ensemble machine learning approach to predict the sporulation potential of metagenome-assembled genomes (MAGs) from uncultivated Firmicutes based on the presence/absence of sporulation-associated genes.
Version: | 0.1.0 |
Depends: | R (≥ 3.5.0) |
Imports: | dplyr, tidyr, tibble, stats |
Suggests: | testthat (≥ 3.0.0), caret, kernlab, randomForest, readr |
Published: | 2025-05-29 |
DOI: | 10.32614/CRAN.package.SpoMAG |
Author: | Douglas Terra Machado
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Maintainer: | Douglas Terra Machado <dougterra at gmail.com> |
License: | Artistic-2.0 |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | SpoMAG results |
Reference manual: | SpoMAG.pdf |
Package source: | SpoMAG_0.1.0.tar.gz |
Windows binaries: | r-devel: SpoMAG_0.1.0.zip, r-release: SpoMAG_0.1.0.zip, r-oldrel: SpoMAG_0.1.0.zip |
macOS binaries: | r-release (arm64): SpoMAG_0.1.0.tgz, r-oldrel (arm64): SpoMAG_0.1.0.tgz, r-release (x86_64): SpoMAG_0.1.0.tgz, r-oldrel (x86_64): SpoMAG_0.1.0.tgz |
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