## ----setup, include = FALSE--------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, message = FALSE, warning = FALSE, comment = "#>", eval = FALSE, include = TRUE, out.width = "100%" ) ## ----eval = TRUE, include = TRUE---------------------------------------------- library(lnmixsurv) library(readr) mod1 <- survival_ln_mixture(Surv(y, delta) ~ x, sim_data$data, starting_seed = 20) mod1 ## ----eval=TRUE, include=TRUE-------------------------------------------------- library(censored) library(ggplot2) library(dplyr) library(tidyr) library(purrr) mod_spec <- survival_reg() |> set_engine("survival_ln_mixture", starting_seed = 20) |> set_mode("censored regression") mod2 <- mod_spec |> fit(Surv(y, delta) ~ x, sim_data$data) ## ----eval = TRUE-------------------------------------------------------------- tidy(mod1) tidy(mod2) ## ----prediction--------------------------------------------------------------- # library(ggplot2) # library(dplyr) # library(tidyr) # library(purrr) # # models <- list(formula = mod1, tidymodels = mod2) # # new_data <- sim_data$data |> distinct(x) # pred_sob <- map(models, ~ predict(.x, new_data, # type = "survival", # eval_time = seq(120) # )) # # bind_rows(pred_sob, .id = "modelo") |> # group_by(modelo) |> # mutate(id = new_data$x) |> # ungroup() |> # unnest(cols = .pred) |> # ggplot(aes(x = .eval_time, y = .pred_survival, col = id)) + # geom_line() + # theme_bw() + # facet_wrap(~modelo) ## ----echo = FALSE, eval = TRUE, fig.width=7----------------------------------- models <- list(formula = mod1, tidymodels = mod2) new_data <- sim_data$data |> distinct(x) pred_sob <- map(models, ~ predict(.x, new_data, type = "survival", eval_time = seq(120) )) bind_rows(pred_sob, .id = "modelo") |> group_by(modelo) |> mutate(id = new_data$x) |> ungroup() |> unnest(cols = .pred) |> ggplot(aes(x = .eval_time, y = .pred_survival, col = id)) + geom_line() + theme_bw() + facet_wrap(~modelo)