## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) library(logrx) ## ----------------------------------------------------------------------------- approved_pkgs <- list( base = "mean", dplyr = "All" ) approved_pkgs ## ----------------------------------------------------------------------------- build_approved(approved_pkgs) ## ----------------------------------------------------------------------------- dir <- tempdir() build_approved(approved_pkgs, file = file.path(dir, "approved.rds")) ## ----------------------------------------------------------------------------- options(log.rx.approved = file.path(dir, "approved.rds")) ## ----------------------------------------------------------------------------- library(dplyr, warn.conflicts = FALSE) results <- mtcars %>% group_by(cyl) %>% summarize(mean = mean(mpg)) %>% mutate(label = "Mean MPG") results %>% tidyr::pivot_wider(names_from = cyl, values_from = mean, id_cols = label) ## ----echo = FALSE------------------------------------------------------------- # write this to the temp directory so we have a script to axecute text <- 'library(dplyr) results <- mtcars %>% group_by(cyl) %>% summarize(mean = mean(mpg)) %>% mutate(label = "Mean MPG") results %>% tidyr::pivot_wider(names_from = cyl, values_from = mean, id_cols = label)' fileConn <- file(file.path(dir, "mpg.R")) writeLines(text, fileConn) close(fileConn) ## ----results='hide', echo = FALSE--------------------------------------------- fp <- file.path(dir, "mpg.R") log_config(fp) logrx:::run_safely_loudly(fp) log_write(fp, remove_log_object = FALSE) ## ----echo=FALSE--------------------------------------------------------------- cleaned_log_vec <- c() cleaned_log_vec <- c( cleaned_log_vec, write_log_header("Used Package and Functions"), write_used_functions() ) cleaned_log_vec <- c( cleaned_log_vec, write_log_header("Unapproved Package and Functions"), write_unapproved_functions() ) cat(cleaned_log_vec, sep = "\n") ## ----cleanup, echo = FALSE---------------------------------------------------- logrx::log_remove() unlink(dir, recursive = TRUE)