# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem          1.0
PortGroup           R 1.0

R.setup             bioconductor Bioconductor BSgenomeForge 1.4.0
revision            0
categories-append   bioconductor
maintainers         nomaintainer
license             Artistic-2
description         Forge BSgenome data packages
long_description    {*}${description}
checksums           rmd160  c7858e0c59f5cfdcca78d15d3a4c5f71b538f77e \
                    sha256  17b1075630b8ddedf3517d80b55a7746c053c9d9c47ec57cf8b2038969f20004 \
                    size    459275
supported_archs     noarch
platforms           {darwin any}

depends_lib-append  port:R-Biobase \
                    port:R-BiocGenerics \
                    port:R-BiocIO \
                    port:R-Biostrings \
                    port:R-BSgenome \
                    port:R-GenomeInfoDb \
                    port:R-GenomicRanges \
                    port:R-IRanges \
                    port:R-rtracklayer \
                    port:R-S4Vectors

patchfiles          patch-no-BSgenome.Celegans.UCSC.ce2.diff

depends_test-append port:R-BiocStyle \
                    port:R-devtools \
                    port:R-GenomicFeatures \
                    port:R-knitr \
                    port:R-rmarkdown \
                    port:R-Rsamtools \
                    port:R-testthat

test.run            yes