# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem          1.0
PortGroup           R 1.0

R.setup             bioconductor Bioconductor edgeR 4.2.1
revision            0
categories-append   bioconductor
maintainers         nomaintainer
license             GPL-2+
description         Empirical analysis of digital gene expression data in R
long_description    {*}${description}
checksums           rmd160  904dcd744034ef7c6e3c53c0abd74c96a9f73627 \
                    sha256  296295d4a465e7edc8ba43903697c6f472f315923b914cd8c4ce38a5d9233931 \
                    size    3433496

depends_lib-append  port:R-limma \
                    port:R-locfit \
                    port:R-Rcpp

patchfiles          patch-no-org.Hs.eg.db.diff

compilers.setup     require_fortran

depends_test-append port:R-AnnotationDbi \
                    port:R-Biobase \
                    port:R-BiocStyle \
                    port:R-jsonlite \
                    port:R-knitr \
                    port:R-readr \
                    port:R-rhdf5 \
                    port:R-SeuratObject \
                    port:R-SummarizedExperiment

test.run            yes