Patch to fix two issues: - upstream does: CC = g++ In order to keep the Makefile the same we set CC = $(CXX) - install target Add DESTDIR so that the destroot phase works properly --- Makefile.orig 2020-03-04 21:45:27.000000000 -0500 +++ Makefile 2020-03-04 21:50:00.000000000 -0500 @@ -1,6 +1,4 @@ -CC = g++ -Wall -ggdb -CC = g++ -pg -CC = g++ +CC = $(CXX) # default with OpenMP # with OpenMP @@ -99,10 +97,10 @@ cdhit-454.o: cdhit-454.c++ cdhit-common.h $(CC) $(CCFLAGS) cdhit-454.c++ -c -PREFIX ?= /usr/local/bin +PREFIX ?= @@PREFIX@@ install: for prog in $(PROGS); do \ - install -m 0755 $$prog $(PREFIX); \ + install -m 0755 $$prog $(DESTDIR)$(PREFIX)/bin; \ done - install -m 0755 *.pl $(PREFIX); + install -m 0755 *.pl $(DESTDIR)$(PREFIX)/bin;